beef cyt bc-1 polypeptide sequences:
1) core 1 protein (446 AA MW 53,603.6 C2348H3675N674O722S22):
10 20 30 40 50 60
1 TATYAQALQS VPETQVSQLD NGLRVASEQS SQPTCTVGVW IDAGSRYESE KNNGAGYFVE
61 HLAFKGTKNR PGNALEKEVE SMGAHLNAYS TREHTAYYIK ALSKDLPKAV ELLADIVQNC
121 SLEDSQIEKE RDVILQELQE NDTSMRDVVF NYLHATAFQG TPLAQSVEGP SENVRKLSRA
181 DLTEYLSRHY KAPRMVLAAA GGLEHRQLLD LAQKHFSGLS GTYDEDAVPT LSPCRFTGSQ
241 ICHREDGLPL AHVAIAVEGP GWAHPDNVAL QVANAIIGHY DCTYGGGAHL SSPLASIAAT
301 NKLCQSFQTF NICYADTGLL GAHFVCDHMS IDDMMFVLQG QWMRLCTSAT ESEVLRGKNL
361 LRNALVSHLD GTTPVCEDIG RSLLTYGRRI PLAEWESRIA EVDARVVREV CSKYFYDQCP
421 AVAGFGPIEQ LPDYNRIRSG MFWLRF
The Protein and mRNA sequence.
2) core 2 protein (439 AA MW 46471 C2063H3278N581O630S7):
SLKVAPKVKATEAPAGVPPHPQDLEFTRLPNGLVIASLENYAPASRIGLFIKAGSRYENSNNLG
TSHLLRLASSLTTKGASSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTT
APEFRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAAYRNALANSLYCPDYRIGKVTPVELH
DYVQNHFTSARMALIGLGVSHPVLKQVAEQFLNIRGGLGLSGAKAKYHGGEIREQNGDSLVHAA
LVAESAAIGSAEANAFSVLQHVLGAGPHVKRGSNATSSLYQAVAKGVHQPFDVSAFNASYSDSGL
FGFYTISQAASAGDVIKAAYNQVKTIAQGNLSNPDVQAAKNKLKAGYLMSVESSEGFLDEVGSQA
LAAGSYTPPSTVLQQIDAVADADVINAAKKFVSGRKSMAASG
NLGHTPFIDEL
gi|401248|sp|P23004|UCR2_BOVIN
[401248]
(View GenPept format,Report format,FASTA format,ASN.1 format,Save As..., 3 MEDLINE links,
or 51 protein neighbors
)
3) bovine cyt b (379 AA MW 42592 C2018H3077N472O502S19):
MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSS
VTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMG
YVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMV
HLLFLHETGSNNPTGISSDVDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPAN
PLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMMFRPLSQCLF
WALVADLLTLTWIGGQPVEHPYITIGQLASVLYFLLILVLMPTAGTIENKLLKW
gi|117843|sp|P00157|CYB_BOVIN
[117843]
(View GenPept format,Report format,FASTA format,ASN.1 format,Save As..., 2 MEDLINE links,
or 100 protein neighbors
)
4) bovine cyt c1 (241 AA MW 27288 C1225H1873N330O349S15):
SDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAYRHLVGVCYTEDEAKALAEE
VEVQDGPNEDGEMFMRPGKLSDYFPKPYPNPEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGY
CEPPTGVSLREGLYFNPYFPGQAIGMAPPIYNEVLEFDDGTPATMSQVAKDVCTFLRWAAEPEHDHR
KRMGLKMLLMMGLLLPLVYAMKRHKWSVLKSRKLAYRPPK
cytochrome c1
gi|223266|prf||0702169A
[223266]
(View GenPept format,Report format,FASTA format,ASN.1 format,Save As..., 1 MEDLINE link,
or 33 protein neighbors
)
5) Rieske Fe2S2 protein (196 AA MW 21611 C957H1508N263
O291S8):
10 20 30 40 50 60
1 SHTDIKVPDF SDYRRPEVLD STKSSKESSE ARKGFSYLVT ATTTVGVAYA AKNVVSQFVS
61 SMSASADVLA MSKIEIKLSD IPEGKNMAFK WRGKPLFVRH RTKKEIDQEA AVEVSQLRDP
121 QHDLERVKKP EWVILIGVCT HLGCVPIANA GDFGGYYCPC HGSHYDASGR IRKGPAPLNL
181 EVPSYEFTSD DMVIVG
UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT PRECURSOR (RIESKE IRO
N-SULFUR PROTEIN).
gi|136703|sp|P13272|UCRI_BOVIN
[136703]
Fe-S ligands are C139, H141, C158, and H161 in mature sequence
That's C217, H219, c236, H239 in preprotein.
recent sequence.
(View GenPept format,Report format
,FASTA format,ASN.1 format,Save As..., 2 MEDLINE links,
or 63 protein neighbors
6) 13 kD protein (NOT UBIQUINONE-BINDING PROTEIN QP-C, but sequence pub as such)110 AA MW 13347 C595H938N173O173S2
AGRPAVSASSRWLEGIRKWYYNAAGFNKLGLMRDDTIHENDDVKEAIRRLPENLYDDRVFRIKRALD
LSMRQQILPKEQWTKYEEDKSYLEPYLKEVIRERKEREEWAKK
gi|136716|sp|P00129|UCRQ_BOVIN
[136716]
(View GenPept format,Report format,FASTA format,ASN.1 format,Save As..., 1 MEDLINE link,
or 13 protein neighbors
)
7) 9.5 kDa protein (81 AA MW 9590 C441H671N128O112S1 Corrected by Yu, Usui, and Yu (C61->W) 1994 Biophys J. 66, A364):
GRQFGHLTRVRHVITYSLSPFEQRAFPHYFSKGIPNVLRRTRACILRVAPPFVAFYLVYTWGTQEFEK
SKRKNPAAYENDR
gi|136719|sp|P13271|UCR7_BOVIN
[136719]
(View GenPept format,Report format,FASTA format,ASN.1 format,Save As..., 1 MEDLINE link,
or 7 protein neighbors
)
8) 11 kd (78 AA MW 9170 C384H620N111O139S5):
GDPKEEEEEEEELVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSQTEEDCTEELLDFLHARDHCV
AHKLFNSLK
UBIQUINOL-CYTOCHROME C REDUCTASE 11 KD PROTEIN (MITOCHONDRIAL HINGE PROTEIN) (CYTOCHROME C1, NONHEME 11 KD PROTEIN) (COMPLEX III SUBUNIT VIII).
gi|136691|sp|P00126|UCR0_BOVIN
[136691]
(View GenPept format,Report format,FASTA format,ASN.1 format,Save As..., 1 MEDLINE link,
or 7 protein neighbors
)
9) 8 kd (78 AA MW 7956 C348H591N106O102S2):
MLSVAARSGP FAPVLSATSR GVAGALRPLV QAAVPATSES PVLDLKRSVL CRESLRGQAA
GRPLVASVSL NVPASVRY
UBIQUINOL-CYTOCHROME C REDUCTASE 8 KD PROTEIN.
gi|136699|sp|P07588|UCR8_BOVIN
[136699]
(View GenPept format,Report format,FASTA format,ASN.1 format,Save As..., 1 MEDLINE link,
or 7 protein neighbors
)
10) 7.2 kd protein (62 AA MW 7198 C335 H516 N89 O88):
VAPTLTARLYSLLFRRTSTFALTIVVGALFFERAFDQGADAIYEHINEGKLWKHIKHKYENK(E)
UBIQUINOL-CYTOCHROME C REDUCTASE 7.2 KD PROTEIN (CYTOCHROME C1, NONHEME 7 KD PROTEIN) (COMPLEX III SUBUNIT X).
gi|136701|sp|P00130|UCRX_BOVIN
[136701]
The published sequence lacks the C-terminal glutamate reported in Schagger et al.
(View GenPept format,Report format,FASTA format,ASN.1 format,Save As..., 1 MEDLINE link,
or 5 protein neighbors
)
11) 6.4 kd protein. (56 AA MW 6363 C293H458N81O76S)
MLTRFLGPRY RQLARNWVPT ASLWGAVGAV GLVwATDwRL ILDWVPYING KFKKDD
|||||||||| |||||||||| |*|||||||| |||*|||*|| |||||||||| ||||||
MLTRFLGPRY RQLARNWVPT AQLWGAVGAV GLVSATDSRL ILDWVPYING KFKKDD
UBIQUINOL-CYTOCHROME C REDUCTASE 6.4 KD PROTEIN (COMPLEX III SUBUNIT XI).
gi|136697|sp|P07552|UCRY_BOVIN
[136697]
The published sequence (2nd line) differs at 3 positions corrected by Schagger et al.
(View GenPept format,Report format,FASTA format,ASN.1 format,Save As..., 1 MEDLINE link,
or 1 protein neighbor
)